BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004C04SP1|AL425237
(972 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig647 1813 0.0
>3x_Contig647
Length = 1778
Score = 1813 bits (907), Expect = 0.0
Identities = 951/969 (98%), Gaps = 3/969 (0%)
Strand = Plus / Minus
Query: 2 agggacacagacaaccagnaggcgagcttatgcgagcttgctcaagaacaaatggatgga 61
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 agggacacagacaaccag-aggcgagcttatgcgagcttgctcaagaacaaatggatgga 1123
Query: 62 gacaataataggtttattcaacaatcattcgaggcaacatagtaacgattgaatcgtagc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 gacaataataggtttattcaacaatcattcgaggcaacatagtaacgattgaatcgtagc 1063
Query: 122 taatatgtctggatgaatttgctttagttaaaaaaaaaaagcacataaaracttgcaaag 181
|||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||
Sbjct: 1062 taatatgtctggatgaatttgcttgagtgaaaaaaaaaaagcacataaagacttgcaaag 1003
Query: 182 gatggtatgtaacctactgactatttacccggacttatttgtccgggtaacaattaccaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 gatggtatgtaacctactgactatttacccggacttatttgtccgggtaacaattaccaa 943
Query: 242 aaacgaaaaahaggaactataatcaaacttkaaggaagccaacattcagtcacgtgaatw 301
|||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 942 aaacgaaaaaaaggaactataatcaaacttgaaggaagccaacattcagtcacgtgaata 883
Query: 302 aattktkttcatgtgacctgtatactttgattccttcacctccatccctaaacatatact 361
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 aattgtgttcatgtgacctgtatactttgattccttcacctccatccctaaacatatact 823
Query: 362 acttgtccagctcgagtaahwyccacccttcccttctgcccctcccccgccccaatcaga 421
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 822 acttgtccagctcgagtaaaacccacccttcgcttctgcccctcccccgccccaatcaga 763
Query: 422 ggccgccaattaccgttattgcccacttaaaawatatcccgcattatccgggcaacccaa 481
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 762 ggccgccaatgaccgttattgcccacttaaaaaatatcccgcattatccgggcaacccaa 703
Query: 482 ggaatattacaccagtcaaattccgtccaaccggaactcaattcctaaaccagtataaaa 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 ggaatattacaccagtcaaattccgtccaaccggaactcaattcctaaaccagtataaaa 643
Query: 542 waccttcagcagcagaacatccagcaaacccgatcgcaaatgtgatctttttcctcccta 601
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 aaccttcagcagcagaacatccagcaaacccgatcgcaaatgtgatctttttcctcccta 583
Query: 602 cttctccaattatacattccccactagtatactttttttccgcttgcctatttcaggtgt 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 cttctccaattatacattccccactagtatactttttttccgcttgcctatttcaggtgt 523
Query: 662 acggttccgacaaacggggcgcaggatattcccaatggaaaagtcaatctttaggaatca 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 acggttccgacaaacggggcgcaggatattcccaatggaaaagtcaatctttaggaatca 463
Query: 722 aaaccaaacgaagaaaaagaaaaagaactgatgcggattttaacaccacgaaaacttctg 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aaaccaaacgaagaaaaagaaaaagaactgatgcggattttaacaccacgaaaacttctg 403
Query: 782 tgtcggactgtggcaattcccaaaatggtgttgtacttcgttccgccattcactttattt 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tgtcggactgtggcaattcccaaaatggtgttgtacttcgttccgccattcactttattt 343
Query: 842 ctacgaaacgtaagcgacggaattttccttcgaattttccttcttatttcctttggggt- 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ctacgaaacgtaagcgacggaattttccttcgaattttccttcttatttcctttggggtc 283
Query: 901 ctcttaaactttagaaggaaacaatgatgctgccaaagg-tagttactgcaaacagaaag 959
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 282 ctcttaaactttagaaggaaacaatgatgctgccaaaggctagttactgcaaacagaaag 223
Query: 960 agaattttt 968
|||||||||
Sbjct: 222 agaattttt 214
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,036
Number of Sequences: 1807
Number of extensions: 12036
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 972
length of database: 10,358,551
effective HSP length: 16
effective length of query: 956
effective length of database: 10,329,639
effective search space: 9875134884
effective search space used: 9875134884
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)